Information for 1-KAMCCAGGGYCRSMMG (Motif 2)

A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
Reverse Opposite:
A G T C A C G T A C G T A T C G A G T C A T C G C T G A A G T C A T G C A T G C C A G T A C T G A T C G A C G T G A C T G T A C
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.676
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 19.4bp
Average Position of motif in Background42.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KAMCCAGGGYCRSMMG
CGCGCCGGGTCACGTA
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----KAMCCAGGGYCRSMMG
NNAGGGACAAGGGCNC----
 A C G T A C G T A C G T A C G T A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KAMCCAGGGYCRSMMG
---CAAAGGTCAAGGG
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KAMCCAGGGYCRSMMG
-TGCCTGCGYCMCCTT
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:KAMCCAGGGYCRSMMG
---NRRGGGTCTT---
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-KAMCCAGGGYCRSMMG
GTCCCCAGGGGA-----
 A C G T A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:KAMCCAGGGYCRSMMG
---CAAAGGTCAG---
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:KAMCCAGGGYCRSMMG
------AGGTCA----
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:KAMCCAGGGYCRSMMG
-WDNCTGGGCA-----
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:KAMCCAGGGYCRSMMG
AGAGCGGGGTCAAGTA
 A C T G C T G A T G C A T A G C G T A C G T C A A T C G A T C G A C T G G A C T A T G C C T A G A T G C G T C A T G C A C T A G
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A