Information for 3-GAAGGAAAAC (Motif 16)

A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
Reverse Opposite:
T A C G C G A T A C G T A G C T A C G T T G A C A G T C A C G T A C G T G T A C
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.865
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif377.1
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets44.1 +/- 24.0bp
Average Position of motif in Background46.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GAAGGAAAAC
--TGGAAAA-
 A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAAGGAAAAC
NATGGAAAAN
 A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAAGGAAAAC
AATGGAAAAT
 A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAAAAC
CGGAAGTGAAAC
 A C G T A C G T A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAAGGAAAAC
NNTGGAAANN
 A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAAAC
NACAGGAAAT-
 A C G T A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAAAAC-
GGAAGTGAAAST
 A C G T A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAAAC-
GAAAMTGAAACT
 A C G T A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAGGAAAAC
AATGGAAAAT
 A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAAAC-
NDCAGGAARTNN
 A C G T A C T G C G T A C G T A A C T G A C T G C G T A C T G A C G T A C G T A A T G C A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G