p-value: | 1e-2 |
log p-value: | -5.299e+00 |
Information Content per bp: | 1.961 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.43% |
Number of Background Sequences with motif | 11.1 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 61.6 +/- 21.8bp |
Average Position of motif in Background | 42.7 +/- 26.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 2.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCTGCACTT VBSYGTCTGG---- |
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PB0041.1_Mafb_1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GTCTGCACTT-- NCTANGTCAGCAAATTT |
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Mafb/MA0117.2/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTGCACTT- NGTCAGCANTTT |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGCACTT CTGTCTGG---- |
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NRL/MA0842.1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCTGCACTT- GTCAGCANNTN |
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PB0042.1_Mafk_1/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTCTGCACTT--- AAGTCAGCANTTTTN |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGCACTT TWGTCTGV---- |
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MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCTGCACTT-- HWWGTCAGCAWWTTT |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTCTGCACTT--- NTNTATGTGCACATNNN |
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PB0026.1_Gm397_1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTCTGCACTT--- NNGTATGTGCACATNNN |
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