Information for 20-TCTTCGTCCCTGT (Motif 38)

A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C T G A C T G C G T A A G T C A T C G G T C A C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.652e+00
Information Content per bp:1.953
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 27.6bp
Average Position of motif in Background87.4 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTTCGTCCCTGT
YCTTTGTTCC---
 A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TCTTCGTCCCTGT-
--------GCTGTG
 A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TCTTCGTCCCTGT
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0108.1_Atf1_2/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCGTCCCTGT
NTTATTCGTCATNC-
 A C G T A C G T A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTTCGTCCCTGT----
NNTNCGCACCTGTNGAN
 A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------TCTTCGTCCCTGT
GARTGGTCATCGCCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TCTTCGTCCCTGT
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCTTCGTCCCTGT
GCTTCC-------
 A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCTTCGTCCCTGT
CCWTTGTYYB---
 A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCGTCCCTGT--
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A G T C A C G T A C G T A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A