Information for 19-GCTCCACCTAGGCCAT (Motif 28)

A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A T G C G A T C A G C T T C G A A C T G A C T G A C G T A C T G A C T G C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.580e+01
Information Content per bp:1.916
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 6.5bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTCCACCTAGGCCAT
-ATCCAC---------
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCTCCACCTAGGCCAT
-------CTAGGCCT-
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCTCCACCTAGGCCAT
NNGGCGACACCTCNNN---
 A C G T A C G T A C G T A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCTCCACCTAGGCCAT
-----AAYTAGGTCA-
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTCCACCTAGGCCAT
GCTCCGCCCMCY----
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTCCACCTAGGCCAT
GCTCCG----------
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCTCCACCTAGGCCAT
NRGCCCCRCCCHBNN---
 A C G T A C G T A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCTCCACCTAGGCCAT
-------CNAGGCCT-
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCTCCACCTAGGCCAT
--NNCACCTGNN----
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCTCCACCTAGGCCAT
--ACCACCTGTT----
 A C T G T A G C A C G T A G T C A G T C C G T A A G T C A G T C A C G T C T G A C T A G A T C G A G T C A G T C G T C A A C G T
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T