Information for 13-CCYCCAGACCAGCTGC (Motif 19)

A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C G T C A A C T G A T G C A C G T A C T G T A C G A C G T A G T C A C G T C T A G A C T G C T G A A C T G T A C G
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.799
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 18.1bp
Average Position of motif in Background50.9 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC
-TCCCAGMCRAGCCCC
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CCYCCAGACCAGCTGC-
-------AGCAGCTGCT
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC
---CCAGACRSVB---
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC----
---NNNNAGCAGCTGCTGAN
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCYCCAGACCAGCTGC---
-------AGCAGCTGCTNN
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC
---CCAGACAG-----
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC
------CAGCAGCTGN
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC-
-------CGCAGCTGCG
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CCYCCAGACCAGCTGC
------NNACAGCTGC
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCYCCAGACCAGCTGC
ATGCCAGACN------
 A T G C A G T C G A C T G T A C A G T C G T C A A C T G C G T A A T G C T G A C G T C A A T C G A G T C A C G T A T C G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T