Information for 6-CAAGGCCAMASAAAGG (Motif 7)

A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
Reverse Opposite:
A T G C A G T C A G C T A C G T A G C T A T C G A C G T A C G T A C G T A C T G A C T G A G T C G T A C G A C T A C G T A C T G
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.722
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.4 +/- 27.9bp
Average Position of motif in Background56.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCCAMASAAAGG
NTCAAGGTCA--------
 A C G T A C G T A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGGCCAMASAAAGG
CAAGGHCANV------
 A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAGGCCAMASAAAGG
CTAGGCCT--------
 A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCCAMASAAAGG
BTCAAGGTCA--------
 A C G T A C G T A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAGGCCAMASAAAGG
CNAGGCCT--------
 A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGCCAMASAAAGG
AAGTTCAAGGTCAGC------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAAGGCCAMASAAAGG---
--AGGTCAACTAAAGGTCA
 A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A

RARA(var.2)/MA0730.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAAGGCCAMASAAAGG---
--AGGTCATGCAAAGGTCA
 A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T T C G A A C T G A C T G A C G T G A T C T G C A G A C T A T C G A G T C C G T A T C G A T C G A C A T G A C T G A C G T A T G C C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAAGGCCAMASAAAGG
TATTCAAGGTCATGCGA---
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAAGGCCAMASAAAGG
TCAAGGTCATA------
 A C G T A G T C G T C A C G T A C A T G A C T G A G T C A G T C C G T A T G C A G T C A T A G C C T G A G T C A C T G A A C T G A T C G
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T