Information for 19-GCAAAADGCCGCG (Motif 29)

A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C T G A C T G A G T C G A C T C G A T A C G T A C G T A G C T T A C G A G T C
p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.846
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.1 +/- 27.7bp
Average Position of motif in Background42.5 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCAAAADGCCGCG----
--ATAAGGGCGCGCGAT
 A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCAAAADGCCGCG----
--ATAAAGGCGCGCGAT
 A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCAAAADGCCGCG
CGACCAACTGCCGTG
 A C G T A C G T A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCAAAADGCCGCG--
AGCAACAGCCGCACC
 A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAADGCCGCG
TTGGCANNNTGCCAAG
 A C G T A C G T A C G T A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCAAAADGCCGCG
GGAAATTCCC---
 A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCAAAADGCCGCG-
CGACCAACTGCCATGC
 A C G T A C G T A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAADGCCGCG
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCAAAADGCCGCG------
-AAAAATGGCGCCATTTTT
 A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GCAAAADGCCGCG
ATATGCAAAT-------
 A C G T A C G T A C G T A C G T A C T G A G T C C T G A C G T A G T C A C G T A C G T A C T A G A G T C G T A C C T A G A G T C A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T