Information for 22-GCMAGATGYCRCT (Motif 34)

A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A C T G C T A G A G T C C G T A A C G T A G T C A C G T A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.900
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 24.1bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCMAGATGYCRCT-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCMAGATGYCRCT
TCCAGATGTT---
 A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCMAGATGYCRCT
VNAVCAGCTGGC---
 A C G T A C G T A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCMAGATGYCRCT
CATCCAGATGTTC--
 A C G T A C G T A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCMAGATGYCRCT
AACAGATGGC---
 A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCMAGATGYCRCT
RCCATMTGTT---
 A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCMAGATGYCRCT-----
---AGATGCTRCTRCCHT
 A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCMAGATGYCRCT
NNVVCAGCTGBN---
 A C G T A C G T A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCMAGATGYCRCT
-CCATATGT----
 A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCMAGATGYCRCT
ATGCCAGACN-----
 A C G T A C G T A C T G A G T C G T C A C G T A A C T G C G T A A C G T A C T G A G T C A G T C T C A G A G T C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T