Information for 16-TTCTCAGCTCACAACT (Motif 28)

A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
Reverse Opposite:
C T G A C T A G C G A T C G A T A C T G C A G T T A C G C G T A A C T G T A G C A C G T A T C G C G T A A C T G T G C A T C G A
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.679
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif43.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets60.3 +/- 22.1bp
Average Position of motif in Background45.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCTCAGCTCACAACT
--ATCACCCCAC----
 A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCTCAGCTCACAACT
ATTAACACCT-------
 A C G T A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCTCAGCTCACAACT
--GTCAGCANNTN---
 A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTCTCAGCTCACAACT
TTMACACCTT------
 A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGCTCACAACT
TTTCACACCT-------
 A C G T A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGCTCACAACT
KTTCACACCT-------
 A C G T A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTCTCAGCTCACAACT
HTTTCCCASG--------
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTCTCAGCTCACAACT
--ATCACCCCAT----
 A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTCTCAGCTCACAACT
TTCACACCTT------
 A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCTCAGCTCACAACT
CTGAGTCAGCAATTT---
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C C G T A A T C G T A G C C G A T A T G C G C T A T A G C C G T A G C T A A G T C A G C T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T