Information for 19-WCCTSCCRAGKSR (Motif 36)

C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
Reverse Opposite:
G A T C A T G C G T C A A G T C A C G T G A T C A C T G A C T G A T C G C G T A A C T G A T C G G C A T
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.793
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.4 +/- 24.8bp
Average Position of motif in Background45.0 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:WCCTSCCRAGKSR--
---TCCCNNGGGACN
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---WCCTSCCRAGKSR
CNGTCCTCCC------
 A C G T A C G T A C G T C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WCCTSCCRAGKSR
-GGTGCCAAGT--
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WCCTSCCRAGKSR
---TGCCCAGNHW
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:WCCTSCCRAGKSR
--TTGCCAAG---
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WCCTSCCRAGKSR--
-ATTCCCAAGGGAAT
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G A C G T A C G T
A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--WCCTSCCRAGKSR
CCCCCTGCTGTG---
 A C G T A C G T C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:WCCTSCCRAGKSR
---TGCCAA----
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:WCCTSCCRAGKSR
-CGTGCCAAG---
 C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----WCCTSCCRAGKSR
SNGCACCTGCHS-----
 A C G T A C G T A C G T A C G T C G T A A T G C A G T C A C G T A T G C A G T C A G T C C T A G C G T A A C T G A C G T A T C G C T A G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T