Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 791)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 27988)	% of Background Sequences with Motif
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-93	-2.159e+02	0.0000	111.0	14.03%	240.7	0.86%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-83	-1.924e+02	0.0000	87.0	11.00%	141.0	0.51%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-22	-5.112e+01	0.0000	32.0	4.05%	101.1	0.36%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-13	-3.094e+01	0.0000	33.0	4.17%	222.0	0.80%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-5	-1.259e+01	0.0002	77.0	9.73%	1571.4	5.65%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-4	-1.015e+01	0.0024	110.0	13.91%	2642.4	9.49%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-4	-9.965e+00	0.0024	28.0	3.54%	422.9	1.52%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-4	-9.359e+00	0.0039	55.0	6.95%	1121.7	4.03%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-3	-8.828e+00	0.0059	51.0	6.45%	1037.9	3.73%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-3	-7.886e+00	0.0137	62.0	7.84%	1387.5	4.98%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-3	-7.699e+00	0.0150	44.0	5.56%	899.2	3.23%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-3	-7.617e+00	0.0150	42.0	5.31%	849.1	3.05%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-3	-7.257e+00	0.0198	43.0	5.44%	892.2	3.21%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-3	-7.198e+00	0.0198	47.0	5.94%	1004.5	3.61%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-3	-6.926e+00	0.0238	32.0	4.05%	614.9	2.21%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-2	-6.755e+00	0.0265	61.0	7.71%	1424.8	5.12%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-2	-6.671e+00	0.0271	32.0	4.05%	624.7	2.24%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-2	-6.541e+00	0.0292	6.0	0.76%	42.8	0.15%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-2	-6.496e+00	0.0292	25.0	3.16%	451.2	1.62%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-2	-6.490e+00	0.0292	53.0	6.70%	1211.0	4.35%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-2	-6.460e+00	0.0292	33.0	4.17%	659.8	2.37%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-2	-6.403e+00	0.0292	61.0	7.71%	1446.1	5.20%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-2	-6.400e+00	0.0292	46.0	5.82%	1017.1	3.65%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-2	-6.221e+00	0.0301	26.0	3.29%	486.4	1.75%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-2	-6.049e+00	0.0344	13.0	1.64%	180.8	0.65%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-2	-6.044e+00	0.0344	38.0	4.80%	813.7	2.92%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-2	-5.918e+00	0.0363	73.0	9.23%	1835.0	6.59%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-2	-5.727e+00	0.0423	35.0	4.42%	746.1	2.68%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-2	-5.396e+00	0.0569	15.0	1.90%	241.2	0.87%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-2	-5.282e+00	0.0617	24.0	3.03%	470.8	1.69%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-2	-5.154e+00	0.0678	18.0	2.28%	321.3	1.15%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-2	-5.149e+00	0.0678	79.0	9.99%	2080.1	7.47%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-2	-5.066e+00	0.0696	27.0	3.41%	559.8	2.01%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-2	-5.059e+00	0.0696	10.0	1.26%	136.5	0.49%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-2	-4.882e+00	0.0789	38.0	4.80%	875.9	3.15%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-2	-4.689e+00	0.0930	28.0	3.54%	604.1	2.17%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-1	-4.503e+00	0.1090	20.0	2.53%	396.8	1.43%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-1	-4.486e+00	0.1090	24.0	3.03%	504.6	1.81%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-1	-4.470e+00	0.1090	77.0	9.73%	2081.0	7.48%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-1	-4.453e+00	0.1090	50.0	6.32%	1255.6	4.51%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-1	-4.381e+00	0.1110	43.0	5.44%	1052.0	3.78%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-1	-4.357e+00	0.1111	24.0	3.03%	510.9	1.84%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-4.235e+00	0.1226	11.0	1.39%	178.5	0.64%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-4.079e+00	0.1399	4.0	0.51%	34.9	0.13%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-4.015e+00	0.1459	68.0	8.60%	1843.6	6.62%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-4.010e+00	0.1459	6.0	0.76%	72.1	0.26%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-1	-3.963e+00	0.1472	20.0	2.53%	419.3	1.51%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-1	-3.916e+00	0.1510	14.0	1.77%	262.3	0.94%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-3.778e+00	0.1698	139.0	17.57%	4157.5	14.94%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-3.767e+00	0.1698	37.0	4.68%	917.2	3.30%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-1	-3.731e+00	0.1711	10.0	1.26%	168.3	0.60%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-3.703e+00	0.1711	5.0	0.63%	57.4	0.21%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-3.703e+00	0.1711	5.0	0.63%	57.4	0.21%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-1	-3.699e+00	0.1711	50.0	6.32%	1315.7	4.73%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-3.672e+00	0.1711	19.0	2.40%	405.6	1.46%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-1	-3.517e+00	0.1930	210.0	26.55%	6572.5	23.61%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-3.408e+00	0.2114	40.0	5.06%	1035.0	3.72%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-1	-3.252e+00	0.2388	8.0	1.01%	133.2	0.48%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-3.252e+00	0.2388	8.0	1.01%	134.0	0.48%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-3.224e+00	0.2413	68.0	8.60%	1925.3	6.92%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-1	-3.107e+00	0.2671	25.0	3.16%	607.2	2.18%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-3.098e+00	0.2671	31.0	3.92%	786.2	2.82%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-1	-3.091e+00	0.2671	25.0	3.16%	608.3	2.19%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1	-2.999e+00	0.2835	81.0	10.24%	2370.5	8.52%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-1	-2.991e+00	0.2835	158.0	19.97%	4916.5	17.66%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-1	-2.960e+00	0.2858	28.0	3.54%	706.3	2.54%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-1	-2.914e+00	0.2947	38.0	4.80%	1014.5	3.64%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-1	-2.895e+00	0.2960	25.0	3.16%	621.1	2.23%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-2.826e+00	0.3124	83.0	10.49%	2458.3	8.83%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-1	-2.822e+00	0.3124	52.0	6.57%	1461.4	5.25%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-2.809e+00	0.3124	7.0	0.88%	121.5	0.44%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-2.808e+00	0.3124	67.0	8.47%	1942.4	6.98%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-1	-2.788e+00	0.3124	10.0	1.26%	199.7	0.72%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-2.778e+00	0.3124	5.0	0.63%	74.7	0.27%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-1	-2.731e+00	0.3162	28.0	3.54%	723.5	2.60%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-2.719e+00	0.3162	6.0	0.76%	99.1	0.36%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-1	-2.705e+00	0.3162	83.0	10.49%	2475.4	8.89%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-1	-2.702e+00	0.3162	96.0	12.14%	2902.5	10.43%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-2.678e+00	0.3165	2.0	0.25%	15.1	0.05%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-2.590e+00	0.3415	18.0	2.28%	434.7	1.56%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-1	-2.541e+00	0.3542	18.0	2.28%	437.9	1.57%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-1	-2.537e+00	0.3542	6.0	0.76%	104.6	0.38%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-2.498e+00	0.3608	39.0	4.93%	1084.5	3.90%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-2.464e+00	0.3686	31.0	3.92%	837.7	3.01%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-1	-2.393e+00	0.3911	38.0	4.80%	1063.2	3.82%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-2.337e+00	0.4087	7.0	0.88%	136.6	0.49%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e-1	-2.308e+00	0.4160	19.0	2.40%	482.3	1.73%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-2.291e+00	0.4183	3.0	0.38%	39.9	0.14%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-2.270e+00	0.4225	28.0	3.54%	761.9	2.74%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.268e+00	0.4225	66.0	8.34%	1981.1	7.12%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.267e+00	0.4225	83.0	10.49%	2541.3	9.13%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-2.260e+00	0.4225	24.0	3.03%	638.6	2.29%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-2.257e+00	0.4225	35.0	4.42%	982.6	3.53%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.252e+00	0.4225	16.0	2.02%	396.7	1.43%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-2.248e+00	0.4225	132.0	16.69%	4184.0	15.03%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-2.204e+00	0.4225	37.0	4.68%	1051.4	3.78%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-2.181e+00	0.4237	6.0	0.76%	115.1	0.41%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.168e+00	0.4248	43.0	5.44%	1247.9	4.48%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.155e+00	0.4264	11.0	1.39%	255.5	0.92%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-2.101e+00	0.4451	14.0	1.77%	346.4	1.24%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.078e+00	0.4512	3.0	0.38%	44.0	0.16%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.027e+00	0.4699	80.0	10.11%	2481.8	8.92%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.021e+00	0.4699	34.0	4.30%	975.7	3.51%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-2.014e+00	0.4699	46.0	5.82%	1363.9	4.90%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-2.010e+00	0.4699	6.0	0.76%	121.9	0.44%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-2.002e+00	0.4699	28.0	3.54%	786.9	2.83%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.988e+00	0.4699	11.0	1.39%	264.3	0.95%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.987e+00	0.4699	30.0	3.79%	851.6	3.06%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.941e+00	0.4795	111.0	14.03%	3538.0	12.71%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.935e+00	0.4795	11.0	1.39%	267.3	0.96%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.916e+00	0.4825	22.0	2.78%	605.1	2.17%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.916e+00	0.4825	43.0	5.44%	1278.1	4.59%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.834e+00	0.5147	12.0	1.52%	303.9	1.09%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-1.823e+00	0.5160	50.0	6.32%	1520.7	5.46%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.806e+00	0.5202	20.0	2.53%	552.1	1.98%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.802e+00	0.5202	43.0	5.44%	1293.8	4.65%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.763e+00	0.5334	3.0	0.38%	50.7	0.18%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.759e+00	0.5334	27.0	3.41%	779.1	2.80%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.752e+00	0.5334	87.0	11.00%	2766.4	9.94%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.746e+00	0.5334	7.0	0.88%	160.6	0.58%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.741e+00	0.5334	49.0	6.19%	1499.7	5.39%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.721e+00	0.5337	11.0	1.39%	280.7	1.01%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.718e+00	0.5337	75.0	9.48%	2369.5	8.51%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.709e+00	0.5337	6.0	0.76%	133.7	0.48%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.694e+00	0.5350	30.0	3.79%	883.5	3.17%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.691e+00	0.5350	25.0	3.16%	722.9	2.60%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.685e+00	0.5350	9.0	1.14%	222.5	0.80%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.683e+00	0.5350	12.0	1.52%	313.5	1.13%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-1.647e+00	0.5434	3.0	0.38%	53.1	0.19%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.637e+00	0.5449	35.0	4.42%	1053.4	3.78%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.629e+00	0.5451	5.0	0.63%	108.5	0.39%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.622e+00	0.5451	10.0	1.26%	256.0	0.92%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.606e+00	0.5495	15.0	1.90%	412.2	1.48%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.580e+00	0.5597	5.0	0.63%	110.9	0.40%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.563e+00	0.5646	43.0	5.44%	1327.4	4.77%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.530e+00	0.5798	78.0	9.86%	2508.0	9.01%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.509e+00	0.5875	7.0	0.88%	172.7	0.62%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.507e+00	0.5875	18.0	2.28%	516.9	1.86%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.476e+00	0.5984	15.0	1.90%	423.9	1.52%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.467e+00	0.5994	35.0	4.42%	1076.1	3.87%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.456e+00	0.6019	115.0	14.54%	3784.4	13.60%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-1.452e+00	0.6019	12.0	1.52%	330.7	1.19%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.413e+00	0.6196	17.0	2.15%	493.2	1.77%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.395e+00	0.6264	62.0	7.84%	1993.4	7.16%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.392e+00	0.6264	4.0	0.51%	89.7	0.32%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.392e+00	0.6264	4.0	0.51%	89.6	0.32%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.367e+00	0.6310	41.0	5.18%	1291.2	4.64%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.366e+00	0.6310	21.0	2.65%	628.3	2.26%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.353e+00	0.6317	27.0	3.41%	827.3	2.97%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.341e+00	0.6346	12.0	1.52%	339.3	1.22%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.337e+00	0.6346	27.0	3.41%	829.0	2.98%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.333e+00	0.6346	57.0	7.21%	1836.2	6.60%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-1.315e+00	0.6388	1.0	0.13%	11.0	0.04%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.308e+00	0.6389	36.0	4.55%	1133.1	4.07%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.303e+00	0.6389	7.0	0.88%	184.6	0.66%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.293e+00	0.6402	3.0	0.38%	64.6	0.23%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.267e+00	0.6533	33.0	4.17%	1039.6	3.74%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.256e+00	0.6559	7.0	0.88%	187.8	0.67%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.238e+00	0.6640	14.0	1.77%	413.4	1.49%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.235e+00	0.6640	24.0	3.03%	743.3	2.67%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.219e+00	0.6682	54.0	6.83%	1757.0	6.31%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.213e+00	0.6682	3.0	0.38%	67.7	0.24%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.209e+00	0.6682	108.0	13.65%	3610.0	12.97%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.180e+00	0.6822	8.0	1.01%	224.4	0.81%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.169e+00	0.6857	9.0	1.14%	257.6	0.93%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.132e+00	0.7069	53.0	6.70%	1741.1	6.26%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.123e+00	0.7089	11.0	1.39%	326.4	1.17%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.116e+00	0.7099	39.0	4.93%	1267.2	4.55%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.112e+00	0.7099	24.0	3.03%	760.9	2.73%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.099e+00	0.7135	83.0	10.49%	2779.1	9.98%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.095e+00	0.7135	41.0	5.18%	1339.3	4.81%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.092e+00	0.7135	79.0	9.99%	2643.8	9.50%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.089e+00	0.7135	4.0	0.51%	103.6	0.37%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.082e+00	0.7135	10.0	1.26%	297.4	1.07%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.082e+00	0.7135	10.0	1.26%	297.3	1.07%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.061e+00	0.7159	43.0	5.44%	1414.1	5.08%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.061e+00	0.7159	28.0	3.54%	903.8	3.25%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.056e+00	0.7159	21.0	2.65%	668.0	2.40%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.046e+00	0.7159	3.0	0.38%	74.5	0.27%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.044e+00	0.7159	7.0	0.88%	202.3	0.73%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.027e+00	0.7200	13.0	1.64%	402.5	1.45%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.010e+00	0.7285	55.0	6.95%	1838.0	6.60%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-9.961e-01	0.7346	6.0	0.76%	173.8	0.62%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-9.846e-01	0.7390	9.0	1.14%	273.2	0.98%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-9.835e-01	0.7390	40.0	5.06%	1327.1	4.77%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-9.649e-01	0.7457	4.0	0.51%	110.9	0.40%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-9.598e-01	0.7457	12.0	1.52%	376.6	1.35%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-9.591e-01	0.7457	1.0	0.13%	17.8	0.06%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-9.406e-01	0.7518	40.0	5.06%	1336.3	4.80%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-9.381e-01	0.7518	17.0	2.15%	548.0	1.97%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-9.194e-01	0.7599	24.0	3.03%	790.3	2.84%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-9.150e-01	0.7599	1.0	0.13%	18.9	0.07%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-9.150e-01	0.7599	1.0	0.13%	18.4	0.07%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-9.106e-01	0.7599	7.0	0.88%	213.7	0.77%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-8.993e-01	0.7599	7.0	0.88%	214.5	0.77%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-8.978e-01	0.7599	54.0	6.83%	1830.3	6.58%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-8.862e-01	0.7617	54.0	6.83%	1833.1	6.59%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-8.851e-01	0.7617	8.0	1.01%	249.7	0.90%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-8.739e-01	0.7634	1.0	0.13%	19.0	0.07%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-8.723e-01	0.7634	170.0	21.49%	5884.1	21.14%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-8.698e-01	0.7634	4.0	0.51%	116.1	0.42%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-8.684e-01	0.7634	3.0	0.38%	83.8	0.30%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-8.662e-01	0.7634	19.0	2.40%	627.2	2.25%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-8.610e-01	0.7634	71.0	8.98%	2431.7	8.74%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-8.455e-01	0.7634	34.0	4.30%	1149.3	4.13%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-8.452e-01	0.7634	16.0	2.02%	527.8	1.90%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-8.452e-01	0.7634	16.0	2.02%	527.4	1.89%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-8.410e-01	0.7634	21.0	2.65%	700.9	2.52%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-8.378e-01	0.7634	48.0	6.07%	1637.5	5.88%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-8.118e-01	0.7697	4.0	0.51%	120.9	0.43%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-8.116e-01	0.7697	6.0	0.76%	188.9	0.68%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-8.075e-01	0.7697	11.0	1.39%	360.8	1.30%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-7.958e-01	0.7711	24.0	3.03%	812.2	2.92%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-7.752e-01	0.7835	59.0	7.46%	2038.6	7.32%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-7.733e-01	0.7835	34.0	4.30%	1165.6	4.19%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-7.725e-01	0.7835	27.0	3.41%	921.3	3.31%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-7.672e-01	0.7835	142.0	17.95%	4949.2	17.78%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-7.607e-01	0.7835	11.0	1.39%	366.2	1.32%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-7.539e-01	0.7835	7.0	0.88%	228.9	0.82%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-7.487e-01	0.7835	26.0	3.29%	891.7	3.20%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-7.456e-01	0.7835	11.0	1.39%	368.4	1.32%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-7.392e-01	0.7835	10.0	1.26%	334.0	1.20%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-7.291e-01	0.7873	21.0	2.65%	720.7	2.59%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-7.070e-01	0.8014	5.0	0.63%	163.1	0.59%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-6.987e-01	0.8044	15.0	1.90%	515.4	1.85%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-6.916e-01	0.8065	14.0	1.77%	481.1	1.73%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-6.835e-01	0.8095	102.0	12.90%	3580.1	12.86%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-6.800e-01	0.8095	55.0	6.95%	1927.8	6.93%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-6.729e-01	0.8110	21.0	2.65%	731.1	2.63%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-6.721e-01	0.8110	7.0	0.88%	237.2	0.85%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-6.450e-01	0.8268	5.0	0.63%	169.4	0.61%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-6.400e-01	0.8273	3.0	0.38%	98.5	0.35%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-6.377e-01	0.8273	16.0	2.02%	561.4	2.02%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-6.344e-01	0.8273	28.0	3.54%	987.3	3.55%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-6.327e-01	0.8273	6.0	0.76%	206.5	0.74%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-6.285e-01	0.8273	61.0	7.71%	2156.9	7.75%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-6.197e-01	0.8273	69.0	8.72%	2442.1	8.77%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-5.998e-01	0.8395	1.0	0.13%	28.7	0.10%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-5.843e-01	0.8490	27.0	3.41%	964.3	3.46%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-5.738e-01	0.8544	18.0	2.28%	645.3	2.32%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.711e-01	0.8544	9.0	1.14%	322.6	1.16%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-5.701e-01	0.8544	58.0	7.33%	2071.9	7.44%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-5.662e-01	0.8544	2.0	0.25%	67.4	0.24%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-5.588e-01	0.8544	33.0	4.17%	1185.4	4.26%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-5.448e-01	0.8616	23.0	2.91%	831.6	2.99%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-5.363e-01	0.8655	8.0	1.01%	291.4	1.05%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-5.291e-01	0.8682	23.0	2.91%	835.8	3.00%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-5.281e-01	0.8682	12.0	1.52%	438.4	1.58%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-5.182e-01	0.8706	52.0	6.57%	1877.2	6.74%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-5.139e-01	0.8709	27.0	3.41%	983.9	3.53%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-5.129e-01	0.8709	3.0	0.38%	109.3	0.39%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-5.123e-01	0.8709	2.0	0.25%	71.2	0.26%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-5.094e-01	0.8709	33.0	4.17%	1200.2	4.31%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-4.997e-01	0.8709	2.0	0.25%	72.7	0.26%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-4.992e-01	0.8709	24.0	3.03%	879.1	3.16%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-4.982e-01	0.8709	8.0	1.01%	297.2	1.07%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-4.917e-01	0.8709	16.0	2.02%	591.9	2.13%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-4.844e-01	0.8709	33.0	4.17%	1208.9	4.34%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-4.703e-01	0.8781	18.0	2.28%	669.3	2.40%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-4.639e-01	0.8804	3.0	0.38%	114.2	0.41%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-4.585e-01	0.8817	20.0	2.53%	745.3	2.68%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.484e-01	0.8873	13.0	1.64%	491.1	1.76%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-4.229e-01	0.9068	46.0	5.82%	1700.5	6.11%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-4.228e-01	0.9068	20.0	2.53%	755.9	2.72%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-4.136e-01	0.9083	6.0	0.76%	236.6	0.85%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-4.104e-01	0.9083	2.0	0.25%	80.3	0.29%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-4.066e-01	0.9083	53.0	6.70%	1960.3	7.04%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-4.056e-01	0.9083	66.0	8.34%	2429.7	8.73%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-4.017e-01	0.9083	67.0	8.47%	2467.7	8.87%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-3.980e-01	0.9083	34.0	4.30%	1275.1	4.58%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-3.862e-01	0.9129	5.0	0.63%	203.0	0.73%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-3.739e-01	0.9208	10.0	1.26%	396.4	1.42%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-3.734e-01	0.9208	8.0	1.01%	320.8	1.15%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.734e-01	0.9208	1.0	0.13%	41.6	0.15%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-3.720e-01	0.9208	4.0	0.51%	165.7	0.60%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-3.691e-01	0.9208	62.0	7.84%	2304.9	8.28%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-3.687e-01	0.9208	8.0	1.01%	321.7	1.16%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-3.636e-01	0.9208	62.0	7.84%	2307.6	8.29%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.595e-01	0.9208	78.0	9.86%	2887.3	10.37%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-3.529e-01	0.9208	27.0	3.41%	1036.6	3.72%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-3.492e-01	0.9208	11.0	1.39%	440.1	1.58%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-3.378e-01	0.9208	2.0	0.25%	89.0	0.32%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.348e-01	0.9208	5.0	0.63%	211.5	0.76%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-3.344e-01	0.9208	12.0	1.52%	482.5	1.73%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-3.288e-01	0.9208	4.0	0.51%	172.6	0.62%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-3.230e-01	0.9214	11.0	1.39%	447.1	1.61%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-3.196e-01	0.9214	43.0	5.44%	1639.8	5.89%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-3.119e-01	0.9253	4.0	0.51%	175.8	0.63%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-3.102e-01	0.9253	17.0	2.15%	679.1	2.44%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-3.066e-01	0.9253	2.0	0.25%	92.1	0.33%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-3.044e-01	0.9253	13.0	1.64%	529.9	1.90%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-3.035e-01	0.9253	12.0	1.52%	491.8	1.77%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-2.950e-01	0.9253	36.0	4.55%	1394.1	5.01%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-2.948e-01	0.9253	24.0	3.03%	948.2	3.41%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-2.762e-01	0.9361	5.0	0.63%	223.8	0.80%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.696e-01	0.9391	3.0	0.38%	141.4	0.51%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-2.665e-01	0.9391	47.0	5.94%	1816.3	6.53%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-2.642e-01	0.9391	14.0	1.77%	581.0	2.09%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.631e-01	0.9391	53.0	6.70%	2039.1	7.33%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.432e-01	0.9514	6.0	0.76%	272.9	0.98%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.420e-01	0.9514	7.0	0.88%	313.7	1.13%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-2.396e-01	0.9514	9.0	1.14%	394.7	1.42%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-2.373e-01	0.9514	47.0	5.94%	1835.9	6.60%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-2.298e-01	0.9515	2.0	0.25%	104.5	0.38%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.272e-01	0.9515	5.0	0.63%	235.2	0.84%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-2.190e-01	0.9556	65.0	8.22%	2514.0	9.03%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-2.182e-01	0.9556	8.0	1.01%	361.9	1.30%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-2.143e-01	0.9556	4.0	0.51%	196.0	0.70%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.101e-01	0.9556	42.0	5.31%	1668.8	6.00%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.081e-01	0.9556	32.0	4.05%	1294.3	4.65%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.066e-01	0.9556	1.0	0.13%	59.1	0.21%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.962e-01	0.9588	28.0	3.54%	1150.6	4.13%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.883e-01	0.9633	22.0	2.78%	925.6	3.33%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.694e-01	0.9786	32.0	4.05%	1321.4	4.75%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.535e-01	0.9911	19.0	2.40%	830.3	2.98%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.442e-01	0.9972	94.0	11.88%	3659.8	13.15%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.434e-01	0.9972	24.0	3.03%	1033.4	3.71%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.380e-01	0.9972	1.0	0.13%	72.8	0.26%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.372e-01	0.9972	56.0	7.08%	2258.6	8.11%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.338e-01	0.9972	1.0	0.13%	73.8	0.27%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.222e-01	1.0000	1.0	0.13%	76.7	0.28%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.124e-01	1.0000	13.0	1.64%	618.4	2.22%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.119e-01	1.0000	3.0	0.38%	184.0	0.66%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.096e-01	1.0000	3.0	0.38%	185.8	0.67%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.030e-01	1.0000	3.0	0.38%	188.2	0.68%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.022e-01	1.0000	9.0	1.14%	458.6	1.65%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-9.895e-02	1.0000	1.0	0.13%	83.4	0.30%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-9.670e-02	1.0000	3.0	0.38%	191.8	0.69%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-9.645e-02	1.0000	8.0	1.01%	419.4	1.51%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-9.320e-02	1.0000	1.0	0.13%	85.1	0.31%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-7.568e-02	1.0000	1.0	0.13%	93.0	0.33%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-6.626e-02	1.0000	20.0	2.53%	952.7	3.42%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-6.529e-02	1.0000	33.0	4.17%	1475.1	5.30%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-6.082e-02	1.0000	17.0	2.15%	836.2	3.00%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-5.162e-02	1.0000	1.0	0.13%	105.8	0.38%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.832e-02	1.0000	2.0	0.25%	169.2	0.61%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-4.760e-02	1.0000	6.0	0.76%	373.6	1.34%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-4.590e-02	1.0000	8.0	1.01%	468.4	1.68%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-2.969e-02	1.0000	2.0	0.25%	190.0	0.68%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-2.794e-02	1.0000	157.0	19.85%	6292.8	22.61%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.666e-02	1.0000	21.0	2.65%	1075.5	3.86%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-2.439e-02	1.0000	44.0	5.56%	2023.9	7.27%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-2.355e-02	1.0000	1.0	0.13%	133.0	0.48%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.306e-02	1.0000	6.0	0.76%	445.7	1.60%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.066e-02	1.0000	3.0	0.38%	292.7	1.05%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-6.088e-03	1.0000	19.0	2.40%	1105.5	3.97%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-3.011e-03	1.0000	12.0	1.52%	827.6	2.97%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-2.219e-03	1.0000	10.0	1.26%	746.5	2.68%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.155e-03	1.0000	1.0	0.13%	237.8	0.85%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	44.3	0.16%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	10.7	0.04%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	18.1	0.07%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	0.000e+00	1.0000	0.0	0.00%	115.1	0.41%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	82.2	0.30%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	9.6	0.03%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	66.4	0.24%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	24.8	0.09%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	25.4	0.09%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	17.5	0.06%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	12.1	0.04%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	70.0	0.25%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.00%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	3.8	0.01%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	26.1	0.09%