Information for 2-CGGTGGGATT (Motif 8)

A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T
Reverse Opposite:
C G T A C T G A C G A T G T A C A G T C A G T C G T C A A G T C G T A C A T C G
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.856
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif52.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets60.8 +/- 26.7bp
Average Position of motif in Background52.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGGTGGGATT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGGATT------
TGAGGGGGATTAACTAT
 A C G T A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGGGATT--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGTGGGATT-------
-AGGGGGATTAGCTGCC
 A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGGATT------
TGAGGGGGATTAACTAT
 A C G T A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGGTGGGATT---
----GGGATTANN
 A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGGATT------
TTAGAGGGATTAACAAT
 A C G T A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGGTGGGATT-
---NGGGATTA
 A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CGGTGGGATT--
----GGGATTAA
 A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGGGATT
NTCGGTGGTCGC
 A C G T A C G T A T G C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A G C T G C A T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C