Information for 6-CTSAGCTCGT (Motif 17)

A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A A C T G A T G C A C G T A T G C C G T A A C T G
p-value:1e-7
log p-value:-1.688e+01
Information Content per bp:1.903
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif27.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.4 +/- 27.4bp
Average Position of motif in Background51.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTSAGCTCGT
-TGACCTYA-
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTSAGCTCGT
-TGACCYCT-
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTSAGCTCGT--
ATGACGTCATCN
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T A C G T A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTSAGCTCGT----
NATGACATCATCNNN
 A C G T A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTSAGCTCGT-
-TGACCTTGAT
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTSAGCTCGT
--CAGCC---
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTSAGCTCGT
ATCAGCTGTT
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTSAGCTCGT
NRRTGACGTCAT
 A C G T A C G T A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTSAGCTCGT-------
-AAAGCTCGTAAAATTT
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTSAGCTCGT-------
-AAACCTCGTAAAATTT
 A G T C A C G T A T C G C G T A A T C G A G T C A C G T A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T