Information for 3-AGGCTTGTATGMTTTG (Motif 7)

C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
Reverse Opposite:
A T G C C G T A T C G A C G T A C A G T T A G C C G T A C A G T G T C A G T A C C G T A C G T A T A C G A G T C G A T C G C A T
p-value:1e-14
log p-value:-3.449e+01
Information Content per bp:1.674
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif34.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.4 +/- 23.1bp
Average Position of motif in Background54.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGGCTTGTATGMTTTG-----
----TNNNATGATTTCNNCNN
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGCTTGTATGMTTTG
--GAATGTTTGTTT--
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGCTTGTATGMTTTG---
---NNTGTTTATTTTGGCA
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGCTTGTATGMTTTG
GTCATGCHTGRCTGS----
 A C G T A C G T A C G T C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGGCTTGTATGMTTTG
------CNGTGATTTN
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGCTTGTATGMTTTG
NNNNTTGTGTGCTTNN
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGGCTTGTATGMTTTG
---TTTGATTGATGN-
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGGCTTGTATGMTTTG
NGTCACGCTTGGCTGC----
 A C G T A C G T A C G T A C G T C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGGCTTGTATGMTTTG
-----TGTTTACTTT-
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGCTTGTATGMTTTG
NNGCGTGTGTGCNGCN
 C G T A C A T G A C T G A G T C G A C T A C G T A C T G C A G T G T C A C G A T A T C G G T C A C G A T A G C T A C G T T A C G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T