Information for 23-AGATCTRATTACA (Motif 33)

C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
Reverse Opposite:
A C G T A C T G G A C T C T G A C G T A A C G T G A C T C G T A A C T G G T C A A C G T G T A C A C G T
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.747
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.3 +/- 20.2bp
Average Position of motif in Background49.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGATCTRATTACA
GKVTCADRTTWC-
 C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGATCTRATTACA
GKMTCADRTTWC-
 C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGATCTRATTACA-----
---TNGAATTTCATTNAN
 C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGATCTRATTACA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGATCTRATTACA--
GGGGTCAAAGTCCAAT
 A C G T C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGATCTRATTACA-
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGATCTRATTACA
TAATCHGATTAC-
 C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGATCTRATTACA
AAAGATCAAAGGGTT
 A C G T A C G T C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGATCTRATTACA
---TCTAATTAAA
 C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A
A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGATCTRATTACA-
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C G T A A C T G G T C A A C G T A G T C G C A T C T G A G T C A A C G T A G C T C T G A G T A C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T