Information for 20-CAAAAAGATACTC (Motif 27)

A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
Reverse Opposite:
A C T G G T C A A T C G A C G T C G T A A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 25.4bp
Average Position of motif in Background30.5 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAAAAAGATACTC
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAAAAGATACTC
GAAACTGAAACT-
 A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAAGATACTC-
GGAAANTGAAACTNA
 A C G T A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAGATACTC
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAAAAGATACTC
GAAAMTGAAACT-
 A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAAAAGATACTC
-AAACAAACATTC
 A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAAAAGATACTC
GAAASYGAAASY-
 A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAAAAGATACTC
GAAAGTGAAAGT-
 A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAAAAGATACTC
ACGAAAGCGAAAGT-
 A C G T A C G T A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAAAAAGATACTC----
AATNTTGATACCCTATN
 A G T C C G T A C G T A C G T A C T G A C G T A A C T G C G T A A C G T C G T A T A G C A C G T A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T