Information for 8-GCAGGACKGCMTGCTG (Motif 16)

A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G
Reverse Opposite:
T G A C C G T A A C T G G T A C C G T A A C T G A C T G A G T C G T A C A C T G A G C T A G T C A G T C C G A T C A T G A T G C
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.738
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 18.7bp
Average Position of motif in Background60.7 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.59
Offset:9
Orientation:forward strand
Alignment:GCAGGACKGCMTGCTG---
---------CCTGCTGAGH
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCAGGACKGCMTGCTG-----
------NNTCCTGCTGTGNNN
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCAGGACKGCMTGCTG-----
------TNTCCTGCTGTGNNG
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCAGGACKGCMTGCTG-----
------TCNCCTGCTGNGNNN
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCAGGACKGCMTGCTG---
----GGCCYCCTGCTGDGH
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAGGACKGCMTGCTG
CCWGGAATGY------
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCAGGACKGCMTGCTG--
------CCCCCTGCTGTG
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GCAGGACKGCMTGCTG--
--------GCCATCTGTT
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCAGGACKGCMTGCTG
NCTGGAATGC------
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCAGGACKGCMTGCTG------
-------RGSMTBCTGGGAAAT
 A T C G G A T C C G T A C T A G A C T G C T G A T A G C C A T G A C T G G T A C G T A C C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T