Information for 5-VTTTCCHGCTGCTGGC (Motif 9)

T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A T C G A G T C C G T A A T C G G T A C C A G T A C T G A C T G G T C A C T G A C G T A A C G T
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 29.1bp
Average Position of motif in Background37.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-VTTTCCHGCTGCTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--VTTTCCHGCTGCTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----VTTTCCHGCTGCTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:VTTTCCHGCTGCTGGC
---GCCATCTGTT---
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:VTTTCCHGCTGCTGGC
----NCAGCTGCTG--
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:VTTTCCHGCTGCTGGC
---RCCATMTGTT---
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:VTTTCCHGCTGCTGGC
----CCAGCTGTTN--
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:VTTTCCHGCTGCTGGC
-----CAGCTGNT---
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:VTTTCCHGCTGCTGGC
---GCCAGCTGBTNB-
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:VTTTCCHGCTGCTGGC
---ACCATCTGTT---
 T C G A A C G T G A C T A C G T A G T C A G T C G T C A A C T G A T G C A C G T C T A G A T G C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T