Information for 23-AAAAAAAAAGAAA (Motif 34)

C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
Reverse Opposite:
C G A T A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T G A C T A C G T A C G T A C G T
p-value:1e-2
log p-value:-4.663e+00
Information Content per bp:1.867
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif305.9
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets44.7 +/- 28.9bp
Average Position of motif in Background55.8 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAGAAA
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAGAAA
AACAAACAACAAGAG-
 A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAAAAGAAA
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAGAAA
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAGAAA
AGCCGAAAAAAAAAT---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAGAAA----
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A A C G T A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAAAAAAAAGAAA--
---GAAAMTGAAACT
 C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAAAGAAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAAAAGAAA-
CAAAAGTAAACAAAG
 A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAGAAA
AAATAAGAAAAAAC---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G T A T G C A G T C A C G T A C T G A C T A G C T G A C T G A C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T