Information for 20-CAAGTTTCTCAAG (Motif 23)

A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C G T A A C T G C G T A G T C A C G T A A G T C A C G T A G C T A C T G
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.946
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 16.0bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAAGTTTCTCAAG
GKVTCADRTTWC-----
 A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAAGTTTCTCAAG
---GTTGCGCAAT
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAAGTTTCTCAAG
---HTTTCCCASG
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAAGTTTCTCAAG
--AGCCACTCAAG
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTTTCTCAAG
GKMTCADRTTWC-----
 A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAAGTTTCTCAAG
---ATTGCGCAAT
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAAGTTTCTCAAG
---ATTGCGCAAT
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAAGTTTCTCAAG-----
---ANTTCTCAGGAANNN
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

CEBPD/MA0836.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAAGTTTCTCAAG
---ATTGCGCAAT
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGTTTCTCAAG
CAAGCTT------
 A G T C C T G A C G T A A C T G A C G T A C G T C G A T A G T C A C G T A G T C C G T A C G T A A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T