Information for 7-KADTTTTATGGGWCAG (Motif 14)

A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G C G A T A T G C A G T C A G T C C G T A C G A T G T C A C G T A G T C A C G T A G A C T C G A T G T A C
p-value:1e-10
log p-value:-2.331e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 22.8bp
Average Position of motif in Background57.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-KADTTTTATGGGWCAG
NGANTTTTATGGCTCN-
 A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KADTTTTATGGGWCAG
--NTTTTATTGG----
 A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KADTTTTATGGGWCAG
--NTTTTATTGG----
 A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-KADTTTTATGGGWCAG
NNANTTTTATTGGNNN-
 A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:KADTTTTATGGGWCAG
---TTTTATTRGN---
 A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:KADTTTTATGGGWCAG
---TTTTATKRGG---
 A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:KADTTTTATGGGWCAG
---TTTTATGGCTN--
 A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:KADTTTTATGGGWCAG
--TTTTTATTGG----
 A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KADTTTTATGGGWCAG
NNAATTTTATTGGNTN-
 A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--KADTTTTATGGGWCAG
ANTAATTTTATGGCCGN-
 A C G T A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A C T A G
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T A C G T