Information for 3-GCTGACAATTGGA (Motif 4)

A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
Reverse Opposite:
A C G T A T G C A T G C C G T A C G T A A C G T A C G T A C T G A C G T G T A C C G T A C T A G A G T C
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 34.5bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTGACAATTGGA---
NNTNNACAATGGGANNN
 A C G T A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTGACAATTGGA
RHTGWCAR-----
 A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGACAATTGGA-
NNNTAACAATTATAN
 A C G T A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTGACAATTGGA
VGCTGWCAVB----
 A C G T A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTGACAATTGGA
--TGGCAGTTGN-
 A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCTGACAATTGGA
---GACAATGNN-
 A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTGACAATTGGA
NNCNNAACAATTNT-
 A C G T A C G T A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGACAATTGGA
ARNTGACA------
 A C G T A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTGACAATTGGA
-TTGACAG-----
 A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCTGACAATTGGA
--TGGCAGTTGG-
 A C T G A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A T C G A T C G G T C A
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T