Information for 4-CGGKAGGGTT (Motif 13)

A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T
Reverse Opposite:
G T C A C T G A A T G C A G T C A G T C A C G T T G A C A G T C G T A C T A C G
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.757
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif60.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.8 +/- 29.0bp
Average Position of motif in Background46.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGGKAGGGTT---
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGKAGGGTT
CACAGCAGGGGG
 A C G T A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGKAGGGTT--
--GGAGGGGGAA
 A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGKAGGGTT
-GGGGGGGG-
 A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGGKAGGGTT--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGGKAGGGTT
DCTCAGCAGG---
 A C G T A C G T A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGGKAGGGTT-----
----AGGGTAACAGC
 A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGKAGGGTT---
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGKAGGGTT
GGGGGCGGGGC
 A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGKAGGGTT
GTGGGGGGGG-
 A C G T A T G C C A T G A C T G A C T G G T C A A C T G C T A G A T C G A G C T A C G T
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T