Information for 1-TTCYTTCMAAARGCAS (Motif 1)

A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G G T A C A G C T A C G T C G A T C A G T A C T G A C T G C G T A C G T A C T A G A C T G C G T A C T G A
p-value:1e-14
log p-value:-3.376e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 18.1bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F2/MA0683.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCYTTCMAAARGCAS
CTCATTAATTATGCAT
 A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTCYTTCMAAARGCAS
CTCATTAATTATGCAT
 A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTCYTTCMAAARGCAS
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TTCYTTCMAAARGCAS
--CCTTTTATAGNC--
 A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TTCYTTCMAAARGCAS
--CATTAATTATTCAT
 A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A C G T A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TTCYTTCMAAARGCAS
-------AAAAGTCAA
 A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-TTCYTTCMAAARGCAS
NNTGTTTATTTTGGCA-
 A C G T A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.46
Offset:-4
Orientation:reverse strand
Alignment:----TTCYTTCMAAARGCAS
NNNTTTCCTGGAAA------
 A C G T A C G T A C G T A C G T A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----TTCYTTCMAAARGCAS
NNAYTTCCTGHN--------
 A C G T A C G T A C G T A C G T A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-TTCYTTCMAAARGCAS
TTTCCCGCCAAA-----
 A C G T A G C T A C G T A G T C A G C T A C G T A C G T T A G C G T A C G T C A C G T A C G T A C T A G A C T G A G T C C G T A A T G C
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T A C G T A C G T