p-value: | 1e-13 |
log p-value: | -3.120e+01 |
Information Content per bp: | 1.905 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 43.3 +/- 31.1bp |
Average Position of motif in Background | 69.1 +/- 5.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCAGCCTGGCAGT ----CTTGGCAA- |
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Myb/MA0100.2/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TCAGCCTGGCAGT--- ------TGGCAGTTGN |
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PB0149.1_Myb_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCAGCCTGGCAGT------ ---NNNTGGCAGTTGGTNN |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCAGCCTGGCAGT DCTCAGCAGG----- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCAGCCTGGCAGT -----TTGGCA-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCAGCCTGGCAGT ----NTTGGCANN |
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AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCAGCCTGGCAGT--- ------TGGCAGTTGG |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCAGCCTGGCAGT ---VGCTGWCAVB |
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YY1/MA0095.2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCAGCCTGGCAGT -CAAGATGGCGGC |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCAGCCTGGCAGT -CAGCC------- |
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