Information for 11-AAGTTGCAAATCA (Motif 18)

C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A
Reverse Opposite:
A C G T C T A G C G T A A C G T A C G T A C G T A C T G A G T C G T C A C G T A G T A C A C G T A C G T
p-value:1e-6
log p-value:-1.410e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 15.4bp
Average Position of motif in Background69.2 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGTTGCAAATCA
-ATATGCAAAT--
 C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGTTGCAAATCA-
AATATGCAAATTAG
 C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAGTTGCAAATCA-
-ATATGCAAATNNN
 C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AAGTTGCAAATCA-
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAGTTGCAAATCA
-TTATGCAAAT--
 C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAGTTGCAAATCA-
--WATGCAAATGAG
 C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGTTGCAAATCA
NATGTTGCAA----
 A C G T C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGTTGCAAATCA--
TTGTATGCAAATTAGA
 A C G T C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGTTGCAAATCA
AATATGCAAATT-
 C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGTTGCAAATCA--
TTGTATGCAAATTAGA
 A C G T C G T A C G T A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C G T A G T C G T C A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A