p-value: | 1e-9 |
log p-value: | -2.185e+01 |
Information Content per bp: | 1.912 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 63.5 +/- 28.6bp |
Average Position of motif in Background | 36.1 +/- 18.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCACTCKRGTGG AGCCACTCAAG--- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCACTCKRGTGG RSCACTYRAG--- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCACTCKRGTGG NSCACTYVAV--- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCACTCKRGTGG MRSCACTYAA---- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCACTCKRGTGG AASCACTCAA---- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCACTCKRGTGG -CCACTTGAA--- |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCACTCKRGTGG ACCACTTGAA--- |
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ZNF354C/MA0130.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | GCCACTCKRGTGG-- ---------GTGGAT |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCACTCKRGTGG- ATAACCACTTGAAAATT |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCACTCKRGTGG AGCCAATCGG---- |
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