Information for 4-TTTCTGCHATGATGHC (Motif 8)

A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C G T A T G C G T C A A C G T C A G T A C T G A G T C C G T A A T C G C T G A G T C A C G T A
p-value:1e-7
log p-value:-1.811e+01
Information Content per bp:1.779
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.5 +/- 21.1bp
Average Position of motif in Background50.3 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTGCHATGATGHC
ANATTTTTGCAANTN----
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCTGCHATGATGHC
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTTCTGCHATGATGHC
VBSYGTCTGG---------
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTGCHATGATGHC
NSTGTTTRCWCAGBNNN-
 A C G T A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTTCTGCHATGATGHC
CTGTCTGG---------
 A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTGCHATGATGHC
NATTGTGCAAT------
 A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCTGCHATGATGHC
NNGCGTGTGTGCNGCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTTCTGCHATGATGHC
GGTCTGGCAT------
 A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TTTCTGCHATGATGHC
TWGTCTGV---------
 A C G T A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TTTCTGCHATGATGHC
---CTGCCCGCA----
 A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T