Information for 6-AGGGAGGCCAAAT (Motif 5)

G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
Reverse Opposite:
C G T A A G C T A C G T C G A T C T A G C T A G G T A C A T G C A C G T G T A C A G T C T G A C C A G T
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.737
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets67.4 +/- 29.5bp
Average Position of motif in Background49.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGGAGGCCAAAT---
-ARGAGGMCAAAATGW
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T A C G T A C G T A C G T
A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGGAGGCCAAAT-
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGGGAGGCCAAAT
----AGGCCTNG-
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGGGAGGCCAAAT
-----TGCCAA--
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGGGAGGCCAAAT
---CGTGCCAAG-
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGGGAGGCCAAAT
----AGGCCTAG-
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGGAGGCCAAAT
---AAGGTCAC--
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGGAGGCCAAAT
--TRAGGTCA---
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGGAGGCCAAAT
---GGTGCCAAGT
 G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGGGAGGCCAAAT
TATAAGTAGGTCAA--
 A C G T A C G T A C G T G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T