Information for 7-ATYACTAKKTAAR (Motif 8)

C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A
Reverse Opposite:
G A C T C G A T A C G T C G T A G T C A G T C A A C G T C T G A A C T G A C G T C T A G C G T A A C G T
p-value:1e-12
log p-value:-2.786e+01
Information Content per bp:1.872
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 12.6bp
Average Position of motif in Background46.5 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATYACTAKKTAAR---
GAAAACTAGTTAACATC
 A C G T C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATYACTAKKTAAR
---ACTAGTTAAC
 C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATYACTAKKTAAR
----CTAATTAA-
 C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A
A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

PH0175.1_Vax2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATYACTAKKTAAR--
GTGCACTAATTAAGAC
 A C G T C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATYACTAKKTAAR--
CAAAACCAATTAATTT
 A C G T C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATYACTAKKTAAR----
ANNNCTAGTTAACNGNN
 C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATYACTAKKTAAR-
---NCTAATTAANN
 C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T
A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATYACTAKKTAAR---
GATTATTAATTAACTTG
 A C G T C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

PH0135.1_Phox2a/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATYACTAKKTAAR----
-NNACTAATTAATNNNN
 C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

PH0132.1_Pax6/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATYACTAKKTAAR----
-TGATTAATTAATTGAC
 C G T A C G A T A G T C C G T A A G T C A G C T C G T A A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C