Information for 6-AGAAAACAAASAWGAA (Motif 7)

C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
Reverse Opposite:
C G A T A C G T G T A C C G T A C A G T A T C G A G C T A G C T A C G T T A C G C G A T A C G T A C G T C G A T A T G C A C G T
p-value:1e-12
log p-value:-2.949e+01
Information Content per bp:1.796
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 15.4bp
Average Position of motif in Background27.4 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGAAAACAAASAWGAA----
AGTAAACAAAAAAGAACANN
 C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A A C G T A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGAAAACAAASAWGAA
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGAAAACAAASAWGAA
AAAGTAAACAAAAATT--
 A C G T A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAAAACAAASAWGAA
AAGTAAACAAA------
 A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGAAAACAAASAWGAA
AAAAAGTAAACAAAGAC---
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGAAAACAAASAWGAA
AAAAAGTAAACAAACAC---
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGAAAACAAASAWGAA
AAAAAGTAAACAAACAC---
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGAAAACAAASAWGAA
---AAACAAACATTC-
 C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAAAACAAASAWGAA
AGAAGAACAAAGGACTA
 A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAAAACAAASAWGAA
ATAAGAACAAAGGACTA
 A C G T C G T A A T C G C G T A C G T A C G T A C G T A A G T C C G T A C T G A C T G A T A G C G T C A C G A T A C T G G T C A C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A