Information for 19-CCAATCAGCG (Motif 31)

A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.3 +/- 37.7bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCAGCG----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.82
Offset:-7
Orientation:forward strand
Alignment:-------CCAATCAGCG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CCAATCAGCG
CCAATCAA--
 A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCAATCAGCG
AGCCAATCGG--
 A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CCAATCAGCG
ACTAGCCAATCA---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCAATCAGCG---
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCAATCAGCG
CAAATCACTG
 A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCAATCAGCG
CCCAATTAGC-
 A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCAATCAGCG---
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0097.1_Lhx6_2/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCAATCAGCG---
TCCACTAATTAGCGGTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T