Information for 11-ACACASCCTGCKG (Motif 18)

T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G
Reverse Opposite:
T A G C G T C A A C T G T A G C C G T A A C T G C T A G A T G C C A G T A C T G G C A T C A T G A G C T
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.642
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.33%
Number of Background Sequences with motif697.0
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets49.1 +/- 29.8bp
Average Position of motif in Background50.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ACACASCCTGCKG--
---CCCCCTGCTGTG
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACACASCCTGCKG
GGCCACACCCAN---
 A C G T A C G T T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACACASCCTGCKG---
-GGCCYCCTGCTGDGH
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACACASCCTGCKG
GGCCACACCCA----
 A C G T A C G T T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:ACACASCCTGCKG--
-------CAGCTGNT
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACACASCCTGCKG---
-GACCCCCCGCTGCGC
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACACASCCTGCKG--
-GACCCCCCGCTGTG
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACACASCCTGCKG---
-GACCCCCCGCTGTGC
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACACASCCTGCKG
GGACACACCCCC---
 A C G T A C G T T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACACASCCTGCKG-
----NAHCAGCTGD
 T C G A G T A C C G T A T G A C G T C A T A C G A G T C A G T C C G A T A C T G G T A C C A G T A T C G A C G T
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T