Information for 5-ATGACCTATC (Motif 10)

C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C
Reverse Opposite:
C T A G C G T A A C G T C T G A C T A G A C T G C G A T A G T C C G T A A G C T
p-value:1e-11
log p-value:-2.707e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif47.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets45.8 +/- 26.1bp
Average Position of motif in Background53.4 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATGACCTATC
-TGACCT---
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATGACCTATC
-TGACCTYA-
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCTATC---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGACCTATC-
-TGACCTARTT
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGACCTATC
-TGACCYCT-
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCTATC---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATGACCTATC---
-TGACCTTTNCNT
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGACCTATC
CATGAC-----
 A C G T C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATGACCTATC-
-TGACCTTGAT
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATGACCTATC----
TTGACCTANTTATN
 C T G A A C G T A C T G C G T A G T A C A G T C A G C T C G T A G A C T A G T C A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A