Information for 10-GGAATTTCCC (Motif 15)

A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
Reverse Opposite:
A C T G T A C G A C T G C G T A C G T A C G T A A C G T A G C T A G T C G T A C
p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.837
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif72.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets45.2 +/- 25.0bp
Average Position of motif in Background48.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCCC
GGGAATTTCC-
 A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCC
GGGAATTTCC-
 A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCCC
NGGGGATTTCCC
 A C G T A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGAATTTCCC
GGAAATCCCC
 A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCC
GGGGATTTCC-
 A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGAATTTCCC
NTGGAATGTN--
 A C G T A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCCC
CCWGGAATGY---
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCCC
NCTGGAATGC---
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCCC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCCC
TGGAATGT---
 A C G T A C T G A C T G C T G A C G T A C G A T C G A T A C G T G T A C A T G C G T A C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T