Information for 11-GCWCTTTTAAASA (Motif 13)

C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
Reverse Opposite:
C G A T A T G C A C G T A G C T A G C T C G T A C T G A T C G A C G T A T A C G C G T A C T A G A G T C
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.736
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.6 +/- 28.1bp
Average Position of motif in Background50.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCWCTTTTAAASA
-CGGTTTCAAA--
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCWCTTTTAAASA
----ATTTGAATT
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCWCTTTTAAASA-
--CCTTTTATAGNC
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCWCTTTTAAASA
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCWCTTTTAAASA
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCWCTTTTAAASA-
--WWATRTAAACAN
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCWCTTTTAAASA
CCTTGCAATTTTTNN--
 A C G T A C G T A C G T A C G T C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCWCTTTTAAASA
------GTAAACA
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCWCTTTTAAASA
-NGCAATTAAA--
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A
A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCWCTTTTAAASA-
----NTTTTACGAC
 C T A G G A T C C G A T A T G C C G A T A G C T A G C T C G A T C T G A C T G A G T C A A T C G C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C