Information for 10-TGAKARRATCAGT (Motif 11)

A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
Reverse Opposite:
C G T A A G T C A C G T A C T G C G T A G A C T G A C T A G C T A G C T G T A C A C G T G T A C C G T A
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.758
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif49.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets44.8 +/- 26.1bp
Average Position of motif in Background44.7 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGAKARRATCAGT
ATGATCGAATCAAA
 A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKARRATCAGT----
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------TGAKARRATCAGT-
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

DUXA/MA0884.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAKARRATCAGT
NTGATTAAATTAN-
 A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TGAKARRATCAGT
TAAACTGATAAGAAGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAKARRATCAGT
AAGATAAGATAACA
 A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

DUX4/MA0468.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAKARRATCAGT
TGATTAAATTA--
 A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TGAKARRATCAGT---
--------TCAGTCTT
 A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAKARRATCAGT
AGATAAGA-----
 A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGAKARRATCAGT---
AAGGCGAAATCATCGCA
 A C G T A C G T A C T G C G T A A C T G C T G A C T G A C T G A C G T A C G A T A G T C C G T A C T A G C G A T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A