Information for 7-GRCAAATATTTGC (Motif 7)

C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C G C T A C G T A C G T A A G C T C T G A A C G T A C G T C G A T C T A G A G C T G A T C
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.827
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.2 +/- 25.8bp
Average Position of motif in Background59.9 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GRCAAATATTTGC
NNTNNCAATATTAG-
 A C G T A C G T C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GRCAAATATTTGC
NNTNNCAATATTAG-
 A C G T A C G T C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GRCAAATATTTGC
-GCTATAAATAGC
 C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GRCAAATATTTGC
AAACAAACATTC--
 A C G T C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GRCAAATATTTGC
---AATTATT---
 C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GRCAAATATTTGC
WAAGTAAAYA-----
 A C G T A C G T C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GRCAAATATTTGC
---AAATCACTGC
 C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GRCAAATATTTGC-
---AAATCACAGCA
 C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GRCAAATATTTGC----
-------ATTTGCATAA
 C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GRCAAATATTTGC
-ACTATAAATAGA
 C T A G C T G A A G T C C G T A C G T A C G T A A G C T C T G A C G A T A C G T C G A T A C T G A G T C
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A