Information for 11-GAGCAAGGGC (Motif 22)

A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T A C G T A C T G A G T C C G A T A G T C
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.944
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.5 +/- 29.2bp
Average Position of motif in Background47.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAAGGGC--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAGCAAGGGC---
---CAAGGHCANV
 A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAAGGGC
TGCGCAGGCGC
 A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGCAAGGGC-
TGGGGAAGGGCM
 A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGCAAGGGC-
AGGTCAAGGTCA
 A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGCAAGGGC-
AGGTCAAGGTCA
 A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGCAAGGGC--
CCGCCCAAGGGCAG
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGCAAGGGC---
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGCAAGGGC
CTGCGCATGCGC
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGCAAGGGC---
GGAGAAAGGTGCGA
 A C G T A C T G C G T A A C T G A G T C C G T A G T C A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A