Information for 14-GAGATTAATC (Motif 15)

A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C
Reverse Opposite:
T A C G C G T A A G C T G C A T C G T A C G T A A C G T G T A C C G A T T G A C
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.844
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif56.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets37.7 +/- 28.5bp
Average Position of motif in Background52.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0138.1_Pitx2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GAGATTAATC---
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GAGATTAATC---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAGATTAATC--
-ATATTAATTAA
 A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GAGATTAATC
RGGATTAR--
 A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GAGATTAATC---
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAGATTAATC-
RGCCATYAATCA
 A C G T A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGATTAATC
NGGATTAA--
 A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGATTAATC
GGGATTAA--
 A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGATTAATC
GGGATTANN-
 A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAGATTAATC-
-TGATTGATGA
 A C T G C G T A A C T G C G T A A C G T C G A T C G T A C T G A A C G T A T G C A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A