Information for 12-GCTCAAGGGA (Motif 14)

A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A
Reverse Opposite:
A C G T A G T C A G T C A G T C A G C T A C G T C A T G C G T A C T A G A T G C
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.837
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif131.1
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets47.1 +/- 27.0bp
Average Position of motif in Background53.2 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCTCAAGGGA-
AGGTCAAGGTCA
 A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTCAAGGGA-
AGGTCAAGGTCA
 A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCTCAAGGGA---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCTCAAGGGA
NGTCCCNNGGGA
 A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTCAAGGGA---
AAGTTCAAGGTCAGC
 A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCTCAAGGGA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTCAAGGGA---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTCAAGGGA--
ATTCCCAAGGGAAT
 A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCTCAAGGGA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTCAAGGGA
-NTCAAGTGG
 A T C G A G T C C G A T G T A C G T C A C T G A C T A G C T A G A C T G T G C A
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G