Information for 5-CAGCTGACCTTTA (Motif 6)

A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
Reverse Opposite:
A C G T C G T A C G T A C T G A C T A G A C T G C G A T A G T C C G T A A C T G A G T C C G A T A C T G
p-value:1e-11
log p-value:-2.706e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 27.6bp
Average Position of motif in Background28.6 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CAGCTGACCTTTA---
----TGACCTTTNCNT
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CAGCTGACCTTTA---
NNNGTGACCTTTGNNN
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CAGCTGACCTTTA---
NNNNTGACCTTTNNNN
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CAGCTGACCTTTA
CNNTTGACCTTTG
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGACCTTTA
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CAGCTGACCTTTA
---CTGACCTTTG
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CAGCTGACCTTTA
---NTGACCTTGA
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGACCTTTA
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CAGCTGACCTTTA-
----TGACCTTGAT
 A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGACCTTTA
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T C T A G C G T A A G T C A G T C A G C T A C G T C G A T G T C A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T