Information for 4-AATATATAAATTCATA (Motif 4)

G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
Reverse Opposite:
A C G T T C G A A C G T A C T G G T C A G T C A C A G T A C G T A C G T C G T A A G C T T C G A C G A T C G T A A C G T A C G T
p-value:1e-14
log p-value:-3.242e+01
Information Content per bp:1.788
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 17.8bp
Average Position of motif in Background71.0 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AATATATAAATTCATA
TCTTTATATATAAATA----
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATATATAAATTCATA
-AYATGYATATGCATR
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATATATAAATTCATA
AATATGCAAATT----
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AATATATAAATTCATA--
--NNNNTGAATTCANNNC
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A A C G T A C G T
A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AATATATAAATTCATA
-ATATGCAAAT-----
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATATATAAATTCATA
AATATGCAAATTAG--
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AATATATAAATTCATA
ANGTTACATAA-------
 A C G T A C G T G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AATATATAAATTCATA
-ATATGCAAATNNN--
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AATATATAAATTCATA--
NTAATTDGCYAATTANNWWD
 A C G T A C G T G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AATATATAAATTCATA
-TTATGCAAATTA---
 G T C A C G T A A C G T C G T A A C G T C T G A A C G T C G T A C G T A G T C A A C G T A C G T G T A C C G T A A C G T G T C A
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T