Information for 17-CAGGGTGAAC (Motif 39)

A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.884e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 22.4bp
Average Position of motif in Background56.5 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAGGGTGAAC-
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAGGGTGAAC---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGTGAAC----
NCWRWGTAAACANSV
 A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGGTGAAC
GGAGGGGGAA-
 A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGTGAAC--
GGTCANNGTGACCTN
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGTGAAC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PB0109.1_Bbx_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGGTGAAC------
TGATTGTTAACAGTTGG
 A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGTGAAC-
NCTAAGTAAACA
 A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGGGTGAAC--
--GGGAGGACNG
 A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGGGTGAAC---
CAAACGTAAACAAT
 A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T