Information for 16-GATCGRMAAG (Motif 38)

C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G
Reverse Opposite:
G T A C C A G T C G A T C A G T G A T C A T G C C T A G C G T A C A G T G T A C
p-value:1e-3
log p-value:-8.966e+00
Information Content per bp:1.592
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX2/MA0755.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATCGRMAAG
TTATCGATTA-
 A C G T C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GATCGRMAAG
NTATCGATTA-
 A C G T C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATCGRMAAG----
AAGATCGGAANTNNNA
 A C G T A C G T C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATCGRMAAG
DGATCRATAN-
 A C G T C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GATCGRMAAG-
GGTCGTAAAAT
 C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GATCGRMAAG
-AACCGANA-
 C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GATCGRMAAG-
-AATGGAAAAT
 C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G A C G T
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GATCGRMAAG--
GAGAACCGAAACTG
 A C G T A C G T C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GATCGRMAAG--
GGTCGTAAAATT
 C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GATCGRMAAG-
-GTCGTAAAAA
 C A T G G T C A G C A T G A T C T A C G C T A G G T C A G C T A G T C A A C T G A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A