Information for 12-TGTACCTAAG (Motif 30)

A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C T G A C T G A C G T G T C A A T G C C G T A
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.952
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif81.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets55.6 +/- 16.9bp
Average Position of motif in Background43.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTACCTAAG---
NNNGTAACTANGNNA
 A C G T A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TGTACCTAAG-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTACCTAAG
AATGTATCAAT-
 A C G T A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGTACCTAAG---
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

GMEB2/MA0862.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTACCTAAG
-TTACGTAA-
 A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G
A C G T A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTACCTAAG
GTTAACTAGN
 A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTACCTAAG-
CTGTTGCTAGGS
 A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTACCTAAG
CTGTTCCTGG-
 A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGTACCTAAG-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PH0112.1_Nkx2-3/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTACCTAAG-
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A G T A C G T A C A C G T C G T A C G T A A C T G A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G