Information for 17-GCCATCAAGAAAC (Motif 25)

A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C G T A G T C C G A T C G A T A C T G G T C A C G A T A C T G A C T G A G T C
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 26.7bp
Average Position of motif in Background33.2 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCAAGAAAC--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCATCAAGAAAC
GGCCATTAAC----
 A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCAAGAAAC
NGCTTTCTAGGAAN
 A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCATCAAGAAAC
BAGTCATANTGAAAG
 A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCATCAAGAAAC-
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCATCAAGAAAC
---NACAGGAAAT
 A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C
A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCCATCAAGAAAC--
-----ACTGAAACCA
 A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCCATCAAGAAAC
---NACAGGAAAT
 A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCATCAAGAAAC----
NNGATCTAGAACCTNNN
 A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCATCAAGAAAC----
--CGTATCGAAACCAAA
 A C T G A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A