Information for 12-KGTAGCTKATKCMWCT (Motif 17)

A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
Reverse Opposite:
G C T A T A C G C G A T C A G T A C T G G T A C C G T A C G A T G T A C C G T A C T A G A T G C A G C T C G T A A T G C G T C A
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.706
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 20.0bp
Average Position of motif in Background45.4 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT
----GHATATKCAT--
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------KGTAGCTKATKCMWCT
NNNTTAGGTAGCNTNT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT
----GAATATTCAT--
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KGTAGCTKATKCMWCT
-----MTGATGCAAT-
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------KGTAGCTKATKCMWCT
NNTGTAGGTAGCANNT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT
--TGAATTATGCAT--
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT---
--TNNATTATGCATANNTT
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT
-----ATGATGCAAT-
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT
--CAGCTGTTTCCT--
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:KGTAGCTKATKCMWCT
GNNAGCTAATCCCCCN
 A C G T A T C G A C G T C T G A A T C G A G T C C G A T A C T G C G T A A C G T C A T G A G T C G T C A C G T A A T G C C G A T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T