Information for 9-AMAAYRSYAAWGAAGS (Motif 13)

C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
Reverse Opposite:
T A G C T A G C C A G T A C G T A G T C C G T A C A G T C G A T C T A G A T G C G A T C C T G A C G A T A C G T C A G T C G A T
p-value:1e-11
log p-value:-2.547e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 21.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:AMAAYRSYAAWGAAGS
----------NGAAGC
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AMAAYRSYAAWGAAGS
--WATGCAAATGAG--
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AMAAYRSYAAWGAAGS-
-CAAAACCAATTAATTT
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G A C G T
A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AMAAYRSYAAWGAAGS
AATATGCAAATTAG--
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AMAAYRSYAAWGAAGS-
-AAAAACCAATTAAGAA
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AMAAYRSYAAWGAAGS
--TATGCWAATBAV--
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AMAAYRSYAAWGAAGS
RNAACAATGG---------
 A C G T A C G T A C G T C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AMAAYRSYAAWGAAGS
-----GGTAATTAAA-
 C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AMAAYRSYAAWGAAGS
RAACAATGGN--------
 A C G T A C G T C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AMAAYRSYAAWGAAGS
RACAAWGG---------
 A C G T C G T A G T C A C G T A G C T A A G C T C T A G T A C G A G T C C G T A G T C A C G A T A C T G G T C A G C T A A T C G A T C G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T